Reference Genome

Single sequence or multi-FASTA with spacers

Ring Configuration

No rings configured

Click "Add New Ring" to start

Parameters

Filter alignments below this identity (50-100)

Filter short alignments (50-5000)

Re-run alignment even if cached results exist

Applies to all rings

Custom blastall parameters (default: megablast -e 1e-5)

Spacer between contigs in multi-FASTA reference (default: 0)

Image Properties

Circular Plot

Upload a reference genome to begin

The plot will generate automatically with GC content/skew rings

Debug Console

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